Can it be measured? Forty-five minutes is enough to find out.Talk to us about your processLanguageENFR

MIR spectroscopy

“Where has my reaction got to, right now? Has my emulsion stabilised? What is the actual concentration in this line?” Three questions asked about a liquid, and settled while the medium is still flowing.

The laboratory remains the reference. What changes is when the answer arrives: on a liquid that is reacting, that moment often decides the batch.

Where you meet it: distillation cut, polymer functionalisation, emulsification, in chemicals as in cosmetics.


The essentials in four points

  • Answers the fundamental vibrations of the bonds, where the bands of the infrared spectrum are at their most intense and most selective.
  • Probes a crossed volume, or a surface: in transmission the beam crosses the medium between two windows; in attenuated total reflection it probes the layer in contact with the crystal.
  • Liquid media: reactions, emulsions, suspensions, viscous polymers, measured without dilution, in under a second per spectrum.
  • Reference texts: in pharma, Ph. Eur. 2.2.24 and USP ‹854›; outside pharma, ASTM E1655 and D6122.

How the measurement works

Transmission or attenuated total reflection: the two modes do not probe the same thing, and that is the first choice to make, ahead of any setting.

A film seen, or a volume crossedOn the left an ATR crystal: the evanescent wave reaches about a micron, and the layer that settles on the crystal becomes what is measured; the signal drifts. On the right transmission: the beam crosses the whole stream between two windows, and what is measured is a volume. ATTENUATED TOTAL REFLECTION The beam stays inside the crystal crystal sampled depth ≈ 1 µm deposited layer TRANSMISSION The beam crosses the stream windows signal, process held constant the drift follows the fouling signal, process held constant the trace stays put Penetration depth: classical optics. Illustrative traces, ungraduated.
A film seen, or a volume crossed. The evanescent wave of an ATR crystal reaches about a micron: the layer that settles becomes what is measured, and the signal drifts while the process has not moved. In transmission the beam crosses the whole stream between two windows. Penetration depth: classical optics. Signal traces illustrative, ungraduated.

A sensor that sees a film alone carries every question of representativeness, whatever the technology.

Where the instrument sits

Mid-infrared measurement module mounted on a bypass loop taken off a column between two tri-clamp ports
On a bypass loop, in process. The module sits on a loop taken off between two ports of the column: the medium circulates through it continuously, the beam crosses it, and nothing is introduced into the main volume. The loop can be cleaned and isolated without touching the process.Image Paeonia Innovations, reproduced with permission.
Stirred laboratory reactor, recirculation loop running through a mid-infrared transmission cell, spectra displayed live on a laptop
On a laboratory reactor. This is where the model is built: the same optics and the same rate as in process, on a volume you control. Spectra scroll past during the reaction, which is what lets you watch the progress before settling the stopping point.Image Paeonia Innovations, reproduced with permission.
Flow chemistry bench, syringe pumps and a mid-infrared module inserted in the line
In flow chemistry. The module fits into the line like one more connector. The medium does not stop to be measured: the composition is read as it passes, at the point in the line where the question arises.Image Paeonia Innovations, reproduced with permission.

Typical applications

Reaction monitoring

Progress, a stopping point driven by the chemistry rather than the clock, over-reaction avoided.

Composition of a liquid

Concentration of a constituent, stabilisation of an emulsion, a constituent running out in distillation.

A real case

A crystallisation known only afterwards: the trajectory becomes visible during the operation.

What is documented to date is set out plainly further down.


Identity card of the technique

CriterionTransmission MIR
What the measurement seesThe fundamental vibrations, not their overtones: the molecular fingerprint. In a volume crossed right through, not in a surface film.
SelectivityExcellent. Well-separated fundamental bands, where NIR sees only overtones that overlap.
What interferesWater absorbs strongly — it is the very short optical path, a few tens of microns, that makes it bearable. And in the fingerprint region, solvent, reagent and product bands overlap.
Sample presentationA short-path cell placed on a recirculation loop. Liquid media, viscous and opaque included, filtered upstream.
What the model requiresA chemometric model as soon as bands overlap. Following a single isolated band can be enough for a switch point.
Reference textsIn pharma: European Pharmacopoeia 2.2.24. At the USP, the enforceable chapter ‹854›, paired with an informational ‹1854›. Outside pharma: ASTM E1655 to build the calibration, ASTM D6122 to validate an on-line analyser.

Transmission or attenuated total reflection: what changes

What is comparedAttenuated total reflection (ATR)Transmission
What is probedA surface, over a small penetration depthA volume, crossed right through
In a heterogeneous mediumThe layer seen describes that layerThe real chemical composition of the medium
Viscous productsContact takes work to guaranteeTakes viscosity in its stride
FoulingThe crystal fouls and the signal followsCleaning built into the process

Why the short optical path is what makes water workable

The very short optical path is what makes water tolerable. In MIR, water absorbs strongly. Over a path of a few centimetres it saturates the detector. Over a few tens of microns it passes enough light for the rest of the medium to express itself.

It is a design argument, and it runs against the intuition. A short path opens aqueous media and suspensions rather than closing them, while keeping the advantage of measuring a volume.

Why the short optical path makes water measurableThe same aqueous medium, measured over two paths. Over a centimetre, water absorption pushes the whole trace above the detector limit and no band can be read. Over twenty-five microns the trace comes back down and the bands of the medium reappear. THE SAME AQUEOUS MEDIUM, TWO PATHS The cell, in section 1 cm path 25 µm path 3500 3000 2500 2000 1500 1000 wavenumber (cm⁻¹) absorbance detector limit Water absorbs everything. The detector saturates. The bands of the medium become readable again. Path options 12 µm 20 µm 25 µm 100 µm 200 µm Range and paths: manufacturer brochure, October 2025. The two thicknesses are not to scale with each other. Illustrative traces, ungraduated.
The same aqueous medium, two paths. Over a centimetre, water absorption holds the whole trace against the detector limit and nothing is left to read. Over twenty-five microns it comes back down and the bands of the medium reappear. Spectral range and path options: manufacturer brochure, October 2025. The two thicknesses are not to scale with each other; illustrative traces, ungraduated.

What these instruments contain

CharacteristicWhat is announced
FormatFrom 450 g for the standard model to 900 g for the high-pressure version; 5 × 5.5 × 6 cm for the standard
Spectral range900 to 1800 cm⁻¹ or 1800 to 3500 cm⁻¹, depending on the version ordered. One instrument carries one or the other; covering both calls for two devices in sequence
AcquisitionOne spectrum every 0.3 second at the fastest
ArchitectureNo moving part, no cooling, no optical fibre
Wetted parts316L stainless steel and Hastelloy C-22, FFKM, germanium, gold and silicon
ConnectivityUSB-C and OPC-UA; Ethernet and TCP/IP on the Plant model; SPC and CSV export
Long-term stabilityOver 100 days, with a cosine similarity of 0.9999 or above — on the raw voltage signal, not on absorbance
Viscosity and temperatureUp to about 10,000 cP, up to 60 °C

Instrument: OrionIR, by Paeonia Innovations. Sources: Paeonia’s Current Models Specifications sheet, 8 September 2026, for format, wetted parts, connectivity, viscosity and temperature. Paeonia’s brochure, October 2025, for acquisition rate and architecture. Clarifications from Paeonia, 14 September 2026, for the spectral range by version and for what the stability figure measures. The 0.3 s cadence and the wetted parts also appear in Paeonia’s public presentation to the Flow Microreactor Meeting 113, 31 July 2026.

Four lines in that table worth reading twice

No moving part, no cooling and no optical fibre removes three frequent causes of downtime for a spectrometer in an industrial setting. Stability beyond a hundred days is measured on the instrument’s raw signal: it says the electronics do not drift, which is what allows re-verification to be spaced out — not that a method stays accurate, which is demonstrated on absorbance and on your own matrix. And the spectral range decides what is visible, but it is chosen at order time: 900 to 1800 cm⁻¹ for the fingerprint region and the C=O band, 1800 to 3500 cm⁻¹ for the C-H, O-H and N-H stretches. That is a trade-off to settle before purchase, on the bands your measurement needs.

The announced rate is a ceiling, not a working setting. At 0.3 second per spectrum the signal-to-noise ratio sits at the edge of degradation. We work at 0.7 second, which gives the best signal-to-noise and still runs well ahead of what most processes ask for. A spectrometer’s top speed is not chosen for its own sake: it is chosen against noise, and the right setting is the slowest one your process tolerates.

The mechanical integration, documented

The installation drawing goes to the end of the loop.

  • A recirculation loop with a bidirectional gear pump, which brings the medium to the cell and returns it to the process.
  • An in-line filter, which protects the cell from the particles that could block it.
  • A three-way valve, which switches between process, cleaning and calibration.
  • A clean in place, followed by drying with nitrogen or dry compressed air.
  • An in-line system check using calibration products, with the process running.
The sampling loop, and its three modesThe measuring cell sits on a recirculation loop rather than immersed in the reactor. Three modes follow one another without opening the process: product circulates and is measured, then a solvent rinses loop and cell to waste, then a dry gas purges the line. THE SAMPLING LOOP solvent dry gas standards Reactor Pump Filter Mid-IR cell 3-way valve Waste Measure Product circulates in a closed loop and returns to the reactor. Clean A solvent rinses loop and cell, to waste. Dry A dry gas purges the line and prepares the next step. Sampling configuration: manufacturer’s public webinar, 30 April 2026. Redrawn.
The loop, and its three modes. The cell sits on a recirculation loop rather than immersed in the reactor. Measure, clean, dry: the three modes follow one another without opening the process. After the sampling configuration presented by the manufacturer at its public webinar of 30 April 2026; redrawn.

That last point changes an installation. How you verify that the instrument is still telling the truth six months on is the question many projects settle late. A mechanical answer, a valve, a calibration product and a procedure, carries further than a stability promise. It lets you keep a model alive with production running.

What is documented today, stated plainly

Two in-line applications, and two off-line applications whose route to in-line is set out. Those are different things, and the distinction belongs here rather than in the customer’s discovery.

ApplicationStageWhat is demonstrated
EmulsificationIn-line, real timeContinuous following of surfactant addition through to stabilisation. Shows that emulsification is a delayed rather than an instantaneous process, and opens an endpoint criterion driven by the chemistry rather than by the clock
Fractional distillationIn-lineDirect and inverse calibration. Real-time detection of a constituent running out
Hydrogen peroxideOff-line, route to in-line set outAssay in aqueous phase. The working range is established on your product, at trial
Polymer functionalisationOff-line, route to in-line set outFollowing the degree of substitution on viscous media measured with no dilution, where titration, magnetic resonance and chromatography return their result after the reaction has moved on
One spectrum every 0.3 second, and the curve that followsSpectra accumulate one after another. One band falls while another rises, and the tracking curve is built point by point until it flattens: that is the endpoint, read on the chemistry rather than on the clock. SPECTRA ACCUMULATE one spectrum every 0.3 second 1800 1600 1400 1200 1000 wavenumber (cm⁻¹) reactant product THE CURVE IS BUILT conversion, point by point time endpoint The criterion becomes chemical, not clock-based. Rate: manufacturer brochure. Constructed traces, ungraduated.
One spectrum every 0.3 second, and the curve that follows. Spectra accumulate, the reactant band falls while the product band rises, and conversion is built point by point until it flattens. That is where the stopping criterion becomes chemical. Rate: manufacturer brochure, October 2025. Constructed traces, ungraduated.

The emulsification case is the most instructive. It measures faster, and it also shows a behaviour the usual methods leave unseen. The bands of the oily constituent appear only after a measurable delay, so a blend stopped when it looks blended can be stopped early. The endpoint criterion becomes chemical, and so defensible.

The domain of the technique, and the domain of the instrument

The two are not the same, and the gap between them is settled at the order.

The domain of the technique is described by USP in its technical guide on drug substances in continuous manufacturing: the mid-infrared spectrum is sensitive to the physical and chemical state of the constituents between 400 and 4000 cm⁻¹, and the region below 1500 cm⁻¹ is what is called the fingerprint region: the absorptions there come from complex interacting vibrations, which gives each compound its own identifiers.

The domain of the instrument is narrower. Against that split, the 900–1800 cm⁻¹ window covers the fingerprint region and reaches just above it to catch the C=O band; the 1800–3500 cm⁻¹ window sits entirely outside the fingerprint and serves the C–H, O–H and N–H stretches. The table above already says as much; what the reference adds is the numbered boundary that lets you choose between the two versions.

The same text states the lower limit of the technique: substances at very low concentration are difficult to determine, the noise level becoming a problem in that region. That is the first point to set against your specification, before the choice of window.

And it gives the example that speaks most directly to a synthesis chemist: Fourier transform mid-infrared separates a drug substance from its impurities — the decomposition of acetylsalicylic acid into salicylic acid, which the odour of acetic acid often signals first. Following a reaction while it runs.

USP Technical Guide, Control strategy for continuous manufacturing of drug substances, © 2025 The United States Pharmacopeial Convention, Rockville, MD — § 2.4.5. An informational document: it carries no requirement.

Where another route serves better

Saying so is part of the work of an integrator. Here are the bounds, as they stand.

Liquids, and a medium that can circulate

A powder, a granule, a tablet belong elsewhere than in a short-path cell. For those matrices the answer is most often NIR spectroscopy, which takes divided solids. The medium here circulates, or is presented in liquid form.

Water is tolerated, and it still occupies part of the spectrum

The short path opens measurement in an aqueous medium, and water keeps its own regions of the spectrum. At high water contents the usable window narrows and the quantitative performance follows. Worth verifying on your real media rather than on a model solvent.

A calibration range has bounds, and the supplier writes them

The application notes state the concentration ranges the models were built on, with the explicit note that beyond those bounds the model saturates. That is good practice, rare enough to be worth pointing out.

The consequence is simple. A model is used inside its domain, which calls for out-of-domain detection alongside the display. That belongs to analytical procedure validation, and it is settled when the model is built.

A short-path cell asks for a filter and a clean in place

A few tens of microns leave little room for agglomerates or precipitates. So the integration drawing carries an in-line filter and a clean in place. On a loaded medium, the design of the loop is the project.

Which kind of model, and what it implies

Both routes are documented here, and the choice follows what you know of your medium.

The pure-component model decomposes the spectrum onto the spectra of the pure components. It calls for a known and declared composition, and it is built with very few process samples. The model calibrated on samples regresses on reference values, and calls for a population representative of the real variability. The high chemical specificity of MIR favours the first route more often than NIR allows, which is a real economic advantage. The full reasoning: pure-component model or model calibrated on samples.

The instruments we implement

PAEONIA, MIR spectroscopy. Laboratory configurations and cells integrable into a process, for continuous measurement on liquid media.

Frequently asked questions

Why transmission rather than an ATR probe, which is more widespread?

ATR works well in homogeneous media that do not foul, which is why it is widespread. Transmission takes over when the medium is heterogeneous (an emulsion, a suspension, a medium that separates) or when a deposit forms: it crosses the volume, gives the real composition, takes viscosity in its stride and cleans in the process.

Can an aqueous medium be measured in MIR?

Yes, and the very short optical path is precisely what allows it. Over a few tens of microns, water passes enough light for the rest of the medium to express itself. The window narrows at high water contents. That is verified on your real samples.

How many samples does the model need?

It follows the route chosen. A decomposition onto pure components needs the spectra of those components and a declared composition. A regression on reference values needs a population covering the real variability of the process, which runs to dozens of samples. The question is settled at scoping.

What happens where a measurement leaves the calibration range?

The model saturates and the value it returns sits outside its founded range, without necessarily saying so. That is why out-of-domain detection is part of a serious deployment. The supplier writes the bounds of its ranges itself. That information belongs in your control strategy rather than in an application note.

Does production have to stop to verify the instrument?

Not where the loop is designed for it. The three-way valve sends a calibration product into the cell while the process continues, then switches back after cleaning and drying. That is a constraint to build into the mechanical design, and it weighs far less than a planned shutdown every quarter.

How does the instrument interface with the control system?

USB, OPC-UA and ASCII export are announced. OPC-UA is the point that counts for a feed to a supervisor or a historian. Data and records management is settled at another level than the protocol. See what "21 CFR Part 11 ready" means, and what it leaves with you.

What is the first deliverable of a project on this technology?

A measurement on your samples, in the laboratory, before any integration. It answers the one question that counts at the start: does the signal separate what you want to follow. Going in-line, the recirculation loop and the cleaning come after, and they are costed once feasibility is in hand. That is the logic of the proof of concept.

Describe your liquid medium. You will hear whether transmission sees it.

Forty-five minutes is enough: placing the feasibility, saying whether the water content or the particle load calls for care, and framing what the integration loop supposes on your side.